Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs113432940 chr6:26256324 T/A 9.07E-5 280 24.48 28.62 18.77 KM Plot
KIRP rs113435056 chr21:44248425 C/T 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs113455294 chr12:116802019 G/A 0 286 26.37 21.17 4.07 KM Plot
KIRP rs113491953 chr10:43484584 G/T 5.4E-5 287 25.63 26.4 11.43 KM Plot
KIRP rs113527114 chr21:44258680 T/C 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs113536473 chr18:3288708 T/TCTCA 2.47E-6 286 25.97 25.35 11.13 KM Plot
KIRP rs113542843 chr5:180266847 T/G 2.1E-8 279 24.48 30.8 9.77 KM Plot
KIRP rs11358343 chr1:59040846 GT/G 4.06E-5 276 25.6 26.2 7.07 KM Plot
KIRP rs113603744 chr21:44266421 A/T 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs113609773 chr21:44232038 C/T 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs113610487 chr1:26544084 C/G 6.3E-5 281 25.67 28.87 13.17 KM Plot
KIRP rs113616123 chr12:49781096 G/A 3.77E-6 287 25.58 37.25 10.97 KM Plot
KIRP rs113657299 chr18:3286866 AT/A 2.96E-6 282 26.28 23.43 11.13 KM Plot
KIRP rs113663609 chr3:99924002 G/A 0.000113 278 24.48 31.13 12.1 KM Plot
KIRP rs113677451 chr21:44320241 C/T 0.000152 288 25.53 43.53 13.07 KM Plot